Index

B

bripipetools.annotation module bripipetools.annotation.flowcellruns module bripipetools.annotation.processedlibs module bripipetools.annotation.sequencedlibs module bripipetools.annotation.workflowbatches module bripipetools.database module bripipetools.database.connection module bripipetools.database.mapping module bripipetools.database.operations module bripipetools.dbification module bripipetools.dbification.control module bripipetools.dbification.flowcellrun module bripipetools.dbification.workflowbatch module bripipetools.io module bripipetools.io.fastqc module bripipetools.io.htseqcounts module bripipetools.io.htseqmetrics module bripipetools.io.picardmetrics module bripipetools.io.sexcheck module bripipetools.io.tophatstats module bripipetools.io.workflow module bripipetools.io.workflowbatch module bripipetools.model module

bripipetools.model.documents module bripipetools.monitoring module bripipetools.monitoring.workflowbatches module bripipetools.parsing module bripipetools.parsing.gencore module bripipetools.parsing.illumina module bripipetools.parsing.processing module bripipetools.postprocessing module bripipetools.postprocessing.cleanup module bripipetools.postprocessing.compiling module bripipetools.postprocessing.stitching module bripipetools.qc module bripipetools.qc.sexcheck module bripipetools.qc.sexpredict module bripipetools.qc.sexverify module bripipetools.submission module bripipetools.submission.batchcreate module bripipetools.submission.batchparameterize module bripipetools.submission.flowcellsubmit module bripipetools.submission.samplesubmit module bripipetools.util module bripipetools.util.files module bripipetools.util.strings module

M

module bripipetools.annotation bripipetools.annotation.flowcellruns bripipetools.annotation.processedlibs bripipetools.annotation.sequencedlibs bripipetools.annotation.workflowbatches bripipetools.database bripipetools.database.connection bripipetools.database.mapping bripipetools.database.operations bripipetools.dbification bripipetools.dbification.control bripipetools.dbification.flowcellrun bripipetools.dbification.workflowbatch bripipetools.io bripipetools.io.fastqc bripipetools.io.htseqcounts bripipetools.io.htseqmetrics bripipetools.io.picardmetrics bripipetools.io.sexcheck bripipetools.io.tophatstats bripipetools.io.workflow bripipetools.io.workflowbatch bripipetools.model bripipetools.model.documents bripipetools.monitoring bripipetools.monitoring.workflowbatches bripipetools.parsing bripipetools.parsing.gencore bripipetools.parsing.illumina bripipetools.parsing.processing bripipetools.postprocessing bripipetools.postprocessing.cleanup bripipetools.postprocessing.compiling bripipetools.postprocessing.stitching bripipetools.qc bripipetools.qc.sexcheck bripipetools.qc.sexpredict bripipetools.qc.sexverify bripipetools.submission bripipetools.submission.batchcreate bripipetools.submission.batchparameterize bripipetools.submission.flowcellsubmit bripipetools.submission.samplesubmit bripipetools.util bripipetools.util.files bripipetools.util.strings